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Cluster V

Modeling and Computational Biology

The application of computational modeling techniques has been key to unveil fundamental laws governing complex biological phenomena. This cluster relies on using advanced knowledge from biology, ecology, chemistry, sociology, mathematics and physics to develop computational models to study phenomena occurring at multiple scales. To do so, we combine computational algorithms with massive data available from diverse sources, ranging from public repositories of social data and biological databases to data generated in-house from environmental prospections (metagenomes), laboratory scale microbial cultures, and in vitro experiments.

Research Lines

Complex networks, neuromorphic computing and biophysics of macromolecules

Use of a mixture of molecular modeling and simulation techniques to explore biophysical processes occurring in transmembrane channels.

Evolutionary and functional genomics of extremophiles

Use of massive databases that are publicly available and evolutionary approaches to address the inventory of genes and mechanisms involved in the survival of extremophiles.

Researchers

Alberto J Martin

Director of the Network Biology Lab

Principal Investigator

Tomas Perez-Acle

Director of the Bioinspired Artificial Intelligence Lab (DLab)

Principal Investigator

Raquel Quatrini

Director of the Microbial Ecophysiology Lab

Principal Investigator

Alvaro Lladser

Director of the Immunoncology Lab

Principal Investigator

Simon Poblete

Simon Poblete

Associate Researcher

Jose Antonio Garate

Jose Antonio Garate

Associate Researcher

Monica Otero

Monica Otero

Associate Researcher

Raul Araya

Raul Araya

Associate Researcher

Carlos Lagos

Carlos Lagos

Associate Researcher

David Holmes

David Holmes

Associate Researcher

Francisco Cubillos

Francisco Cubillos

Associate Researcher

Latest Publications Cluster V

March 19, 2026

Nanostructured Lipid Carriers as Physicochemical Modulators of Complex Natural Extracts: Release Behavior and Bile-Induced Remodeling in Biorelevant Media
Nanostructured Lipid Carriers as Physicochemical Modulators of Complex Natural Extracts: Release Behavior and Bile-Induced Remodeling in Biorelevant Media

January 8, 2026

Transcription-based comparison of Aggregatibacter actinomycetemcomitans or Porphyromonas gingivalis-induced experimental periodontitis
Transcription-based comparison of Aggregatibacter actinomycetemcomitans or Porphyromonas gingivalis-induced experimental periodontitis

January 4, 2026

HPV-18-Immortalised Cells Require the Downregulation of the SncmtRNA-2/Hsa-miR-620 Axis During Cell Transformation.
HPV-18-Immortalised Cells Require the Downregulation of the SncmtRNA-2/Hsa-miR-620 Axis During Cell Transformation.
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