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Laboratory of Epigenetics and Chromatin

Lab Director

Alejandra Loyola, PhD

Our laboratory focuses on understanding how newly synthesized histones are processed prior to their nuclear import and incorporation into chromatin. We and others have characterized a cytosolic maturation pathway through which histones acquire their proper folding and undergo specific post-translational modifications. This pathway involves several protein complexes, each defined by distinct histone chaperones and cofactors. Over recent years, we have investigated individual steps in this pathway and the cellular consequences of its dysregulation.

More recently, our work has uncovered a previously unrecognized mechanism linking histone modifications and translation: lysine monomethylation and PARP1-mediated ADP-ribosylation cooperate to release histones H3 and H4 from ribosomes immediately after synthesis. These findings redefine the ribosome as an active platform for co-translational histone maturation, beyond its traditional role in protein synthesis. We also study histone dynamics in the context of Hepatitis B virus (HBV) infection.

We have found that histone modifications play a key role in regulating viral gene expression, and that the HBV regulatory protein HBx functions as an epigenetic modulator of the viral transcriptional program. We are also investigating viral regulatory proteins, particularly intrinsically disordered proteins such as HBx from hepatitis B virus, and their roles in host gene regulation, mitochondrial function, and metabolic control. In parallel, we are examining functional interactions between HBV and hepatitis D virus (HDV), a satellite virus that exacerbates liver disease.

Lab Members

Research Associates

Rodrigo Villanueva, PhD


Postdoctoral fellows

Francisca Alvarez, PhD

Mariela Andrea Araya Ortega, PhD

Patricio Zapata, PhD


PhD Students

Celia Tamayo Brito


Master Students

Ignacio Aguayo


Undergraduate Students

Mario Villalon

Anais Tudela


Lab Manager

Cristian Vizueta

Grants

FONDECYT R-1240409 [2024-2028]: The role of methylation and ADP-ribosylation on newly synthesized histones H3 and H4. (Principal Investigator)

FB210008 [2021-2031]: Proyecto Financiamiento Basal de Centros de Excelencia, Centro Ciencia & Vida (Principal Investigator).

FONDECYT R-1200577 [2022-2024]: Processing of newly synthesized histones H3 and H4 influences chromatin structure. (Principal Investigator)

Collaborations

Genevieve Almouzni | Institut Curie

Thelma Escobar | Washington University

Axel Imhof, LMU | Ludwig-Maximilians-Universität, Munich University

Danny Reinberg | University of Miami

Selected Publication

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